质粒名称: | pcdna3 flag - ULK1 wt |
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出品公司: | 爱迪基因 |
目录编号: | 27636 |
存储实验室: | Reuben Shaw |
载体骨架基本信息 |
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载体名称: | pcDNA3 |
载体出品公司: | -- |
载体抗性: | 氨苄青霉素 |
空载体大小: | 5500 bp |
完整质粒大小: | -- |
载体修饰: | -- |
载体类型: | 哺乳细胞表达 |
筛选标记: | -- |
高拷贝/低拷贝: | -- |
生长条件: | 37 ℃ |
插入基因信息 |
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插入基因名称: | mouse ULK1 |
物种来源: | M. musculus (mouse) |
插入大小: | 3150 bp |
基因突变: | Initial M from ULK1 removed. |
GenBank编号 | NP_033495.2 |
启动子 | -- |
标签/融合蛋白: | flag(主干上的N终端) |
克隆方法: | Gateway克隆 |
5' 克隆位点: | attR1 (销毁后未知) |
3' 克隆位点: | attR2(销毁后未知) |
5' 测序引物 | t7 promotor |
3' 测序引物 | -- |
文献引用方法 |
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材料和方法部分: | pcdna3 flag - ULK1 wt was a gift from Reuben Shaw (Addgene plasmid # 27636 ; http://n2t.net/addgene:27636 ; RRID:Addgene_27636) |
参考文献部分: | Phosphorylation of ULK1 (hATG1) by AMP-Activated Protein Kinase Connects Energy Sensing to Mitophagy. Egan DF, Shackelford DB, Mihaylova MM, Gelino SR, Kohnz RA, Mair W, Vasquez DS, Joshi A, Gwinn DM, Taylor R, Asara JM, Fitzpatrick J, Dillin A, Viollet B, Kundu M, Hansen M, Shaw RJ. Science. 2010 Dec 23. ():. 10.1126/science.1196371 PubMed 21205641 |
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载体基本信息
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载体序列
LOCUS pcdna3 flag - ULK1 wt 8636 bp ds-DNA circular SYN 06-AUG-2018 DEFINITION synthetic circular DNA ACCESSION . VERSION . KEYWORDS pcdna3 flag - ULK1 wt SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 8636) AUTHORS Egan DF, Shackelford DB, Mihaylova MM, Gelino SR, Kohnz RA, Mair W, Vasquez DS, Joshi A, Gwinn DM, Taylor R, Asara JM, Fitzpatrick J, Dillin A, Viollet B, Kundu M, Hansen M, Shaw RJ TITLE Phosphorylation of ULK1 (hATG1) by AMP-Activated Protein Kinase Connects Energy Sensing to Mitophagy. JOURNAL Science. 2010 Dec 23. ():. PUBMED 21205641 REFERENCE 2 (bases 1 to 8636) AUTHORS . TITLE Direct Submission JOURNAL Exported Aug 6, 2018 from SnapGene Server 1.1.58 http://www.snapgene.com FEATURES Location/Qualifiers source 1..8636 /organism="synthetic DNA construct" /mol_type="other DNA" enhancer 1..380 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 381..584 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" primer_bind 535..555 /label=CMV-F /note="Human CMV immediate early promoter, forward primer" primer_bind 629..648 /label=T7 /note="T7 promoter, forward primer" promoter 629..647 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" regulatory 660..669 /regulatory_class="other" /note="vertebrate consensus sequence for strong initiation of translation (Kozak, 1987)" CDS 669..692 /codon_start=1 /product="FLAG(R) epitope tag, followed by an enterokinase cleavage site" /label=FLAG /translation="DYKDDDDK" protein_bind 705..729 /gene="mutant version of attB" /label=attB1 /bound_moiety="BP Clonase(TM)" /note="recombination site for the Gateway(R) BP reaction" protein_bind complement(3887..3911) /gene="mutant version of attB" /label=attB2 /bound_moiety="BP Clonase(TM)" /note="recombination site for the Gateway(R) BP reaction" promoter complement(3955..3973) /label=SP6 promoter /note="promoter for bacteriophage SP6 RNA polymerase" primer_bind complement(3956..3973) /label=SP6 /note="SP6 promoter, forward primer" primer_bind complement(3993..4010) /label=BGH-rev /note="Bovine growth hormone terminator, reverse primer. Also called BGH reverse" polyA_signal 3999..4223 /label=bGH poly(A) signal /note="bovine growth hormone polyadenylation signal" rep_origin 4269..4697 /direction=RIGHT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" primer_bind complement(4356..4375) /label=F1ori-R /note="F1 origin, reverse primer" primer_bind 4566..4587 /label=F1ori-F /note="F1 origin, forward primer" primer_bind complement(4706..4726) /label=pBABE 3' /note="SV40 enhancer, reverse primer for pBABE vectors" promoter 4711..5040 /label=SV40 promoter /note="SV40 enhancer and early promoter" rep_origin 4891..5026 /label=SV40 ori /note="SV40 origin of replication" primer_bind 4953..4972 /label=SV40pro-F /note="SV40 promoter/origin, forward primer" CDS 5107..5901 /codon_start=1 /gene="aph(3')-II (or nptII)" /product="aminoglycoside phosphotransferase from Tn5" /label=NeoR/KanR /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin(R))" /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF" primer_bind complement(5161..5180) /label=Neo-R /note="Neomycin resistance gene, reverse primer" primer_bind 5771..5790 /label=Neo-F /note="Neomycin resistance gene, forward primer" polyA_signal 6075..6196 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(6112..6131) /label=SV40pA-R /note="SV40 polyA, reverse primer" primer_bind 6166..6185 /label=EBV-rev /note="SV40 polyA terminator, reverse primer" primer_bind complement(6245..6261) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" primer_bind complement(6245..6261) /label=M13 Reverse /note="In lacZ gene. Also called M13-rev" primer_bind complement(6258..6280) /label=M13/pUC Reverse /note="In lacZ gene" protein_bind 6269..6285 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(6293..6323) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 6338..6359 /label=CAP binding site /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." primer_bind complement(6476..6493) /label=L4440 /note="L4440 vector, forward primer" rep_origin complement(6647..7235) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" primer_bind complement(6727..6746) /label=pBR322ori-F /note="pBR322 origin, forward primer" CDS complement(7406..8266) /codon_start=1 /gene="bla" /product="beta-lactamase" /label=AmpR /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" primer_bind 8029..8048 /label=Amp-R /note="Ampicillin resistance gene, reverse primer" promoter complement(8267..8371) /gene="bla" /label=AmpR promoter primer_bind complement(8446..8465) /label=pRS-marker /note="pRS vectors, use to sequence yeast selectable marker" ORIGIN 1 gacattgatt attgactagt tattaatagt aatcaattac ggggtcatta gttcatagcc 61 catatatgga gttccgcgtt acataactta cggtaaatgg cccgcctggc tgaccgccca 121 acgacccccg cccattgacg tcaataatga cgtatgttcc catagtaacg ccaataggga 181 ctttccattg acgtcaatgg gtggagtatt tacggtaaac tgcccacttg gcagtacatc 241 aagtgtatca tatgccaagt acgcccccta ttgacgtcaa tgacggtaaa tggcccgcct 301 ggcattatgc ccagtacatg accttatggg actttcctac ttggcagtac atctacgtat 361 tagtcatcgc tattaccatg gtgatgcggt tttggcagta catcaatggg cgtggatagc 421 ggtttgactc acggggattt ccaagtctcc accccattga cgtcaatggg agtttgtttt 481 ggcaccaaaa tcaacgggac tttccaaaat gtcgtaacaa ctccgcccca ttgacgcaaa 541 tgggcggtag gcgtgtacgg tgggaggtct atataagcag agctctctgg ctaactagag 601 aacccactgc ttactggctt atcgaaatta atacgactca ctatagggag acccaagctg 661 ccaccatgga ctacaaggac gacgacgata aggaattcgt tatcacaagt ttgtacaaaa 721 aagcaggctt cgagccgggc cgaggcggcg tcgagaccgt gggcaagttc gagttctctc 781 gcaaggacct gattggacac ggcgccttcg cggtggtctt caagggtcga caccgcgaga 841 agcacgacct ggaggtggcc gtcaaatgca ttaacaagaa gaaccttgcc aagtcccaaa 901 cactgctggg aaaggaaatc aaaatcctga aggaactaaa gcacgaaaac atcgtggcgc 961 tgtatgactt ccaggaaatg gctaattctg tctacctggt catggagtat tgtaatggtg 1021 gagacctggc tgactacctg cacactatgc gcacactgag tgaagacact gtcaggcttt 1081 tcctacagca gatcgctggc gccatgcggc tgctgcacag caagggcatc atccaccggg 1141 acctgaagcc ccaaaacatc ctgctgtcca accctggggg ccgccgggcc aaccccagca 1201 acatccgagt caagattgct gactttggat tcgctcggta cctccagagc aacatgatgg 1261 cggccacact ctgtggttct cctatgtaca tggctcctga ggtcattatg tcccagcact 1321 acgatggaaa ggctgacctg tggagcattg gcaccattgt ctaccagtgt ctgacaggga 1381 aggccccttt tcaggccagc agccctcagg atttgcgcct gttttatgag aagaacaaga 1441 cactagttcc tgccatcccc cgggagacat cagctcccct gcggcagctg ctcctggctc 1501 tgttgcagcg gaaccacaag gaccgcatgg actttgatga atttttccac caccctttct 1561 tggatgccag cacccccatc aagaaatccc cacctgtgcc tgtgccctca tatccaagct 1621 cagggtctgg cagcagctcc agcagcagct ctgcctccca cctggcctct ccaccgtccc 1681 tgggggagat gccacagcta cagaagaccc ttacctcccc agccgatgct gctggctttc 1741 ttcagggctc ccgggactct ggtggcagca gcaaagactc ctgtgacaca gatgactttg 1801 tcatggtccc agcccagttt ccaggtgatc tagttgctga ggcagccagt gccaagcccc 1861 cacctgatag cctgctgtgt agtgggagct cattggtggc ctctgctggc ctagagagcc 1921 acggccgtac cccctctccc tctccgacct gcagcagctc tcccagcccc tctggccggc 1981 ctggcccctt ctccagcaac aggtacggtg cctcggtccc cattcctgtc cccactcagg 2041 tgcacaatta ccagcgcatc gagcaaaacc tgcaatcgcc cactcaacag cagacagcca 2101 ggtcctctgc catccgaagg tcagggagca ccagccccct gggctttggc cgggccagcc 2161 catcaccccc ctcccacacc gatggagcca tgctggccag gaagctgtca cttggaggtg 2221 gccgtcccta cacaccttct ccccaagtgg gaaccatccc agagcgaccc agctggagca 2281 gagtgccctc cccacaagga gctgatgtgc gggttggcag gtcaccacga cccggttcct 2341 ctgtgcctga gcactctcca agaaccactg ggctgggctg ccgcctgcac agtgccccta 2401 acctgtccga cttccatgtt gtgcgtccca agctgcctaa gcccccaaca gacccactgg 2461 gagccacctt tagcccaccc cagaccagcg caccccagcc atgcccaggg ctacagtctt 2521 gccggccact gcgtggctca cctaagctgc ctgacttcct acagcggagt cccctacccc 2581 ccatcctagg ctctcctacc aaggccgggc cctcctttga cttccccaaa acccccagct 2641 ctcagaattt gctgaccctg ttggctaggc agggggtagt aatgacacca cctcggaacc 2701 gtacactgcc tgacctctcc gaggccagtc ctttccatgg ccagcagctg ggctctggcc 2761 ttcggcccgc tgaagacacc cggggtccct ttggacggtc cttcagcacc agccgcatta 2821 cggacctgct gcttaaggct gcatttggga ctcaggcctc tgactcaggc agcacagaca 2881 gcctacagga gaaacctatg gagattgctc cctctgctgg ctttggaggg actctgcatc 2941 caggagctcg tggtggaggg gccagcagcc cagcacctgt ggtatttact gtaggctccc 3001 cacccagtgg tgccacccca ccccagagta cccgtaccag aatgttctca gtgggctctt 3061 ccagctccct gggctctact ggctcctcct ctgcccgcca cttagtgcct ggggcctgtg 3121 gagaggcccc ggagctttct gccccaggcc actgctgtag ccttgctgac ccccttgctg 3181 ccaacttgga gggggctgtg accttcgagg ctcctgacct cccagaggag accctcatgg 3241 agcaagagca cacggaaacc ctacacagtc tgcgcttcac actagcgttt gcacagcaag 3301 ttctggagat tgcagccctg aagggaagtg ccagtgaggc cgccggtggc cctgagtacc 3361 agctccagga aagtgtggtg gctgaccaga tcagtcagtt gagccgagag tggggctttg 3421 cagagcaact ggttctgtac ttgaaggtgg ctgagctgct gtcctcaggc ctacagactg 3481 ccattgacca gattcgagct ggcaaactct gcctttcatc tactgtgaag caggtggtac 3541 gcagactaaa tgagctgtac aaggccagcg tggtatcctg ccagggcctc agcttgcgac 3601 ttcagcgctt ctttctggac aaacaacggc tgctggacgg gatccatggt gtcactgcag 3661 agcggctcat cctcagccat gctgtgcaaa tggtacaatc agctgccctt gatgagatgt 3721 tccagcaccg agagggctgt gtaccgagat atcacaaagc cctgctattg ctggaggggt 3781 tgcagcacac tctcacggac caggcagaca ttgagaacat tgccaaatgc aagctgtgca 3841 ttgagaggag actctcggcc ctgctgagtg gtgtctatgc ctgaataccc agctttcttg 3901 tacaaagtgg tgataacgtg gatcccactc gagcatgcat ctagagggcc ctattctata 3961 gtgtcaccta aatgctagag ctcgctgatc agcctcgact gtgccttcta gttgccagcc 4021 atctgttgtt tgcccctccc ccgtgccttc cttgaccctg gaaggtgcca ctcccactgt 4081 cctttcctaa taaaatgagg aaattgcatc gcattgtctg agtaggtgtc attctattct 4141 ggggggtggg gtggggcagg acagcaaggg ggaggattgg gaagacaata gcaggcatgc 4201 tggggatgcg gtgggctcta tggcttctga ggcggaaaga accagctggg gctctagggg 4261 gtatccccac gcgccctgta gcggcgcatt aagcgcggcg ggtgtggtgg ttacgcgcag 4321 cgtgaccgct acacttgcca gcgccctagc gcccgctcct ttcgctttct tcccttcctt 4381 tctcgccacg ttcgccggct ttccccgtca agctctaaat cgggggctcc ctttagggtt 4441 ccgatttagt gctttacggc acctcgaccc caaaaaactt gattagggtg atggttcacg 4501 tagtgggcca tcgccctgat agacggtttt tcgccctttg acgttggagt ccacgttctt 4561 taatagtgga ctcttgttcc aaactggaac aacactcaac cctatctcgg tctattcttt 4621 tgatttataa gggattttgc cgatttcggc ctattggtta aaaaatgagc tgatttaaca 4681 aaaatttaac gcgaattaat tctgtggaat gtgtgtcagt tagggtgtgg aaagtcccca 4741 ggctccccag caggcagaag tatgcaaagc atgcatctca attagtcagc aaccaggtgt 4801 ggaaagtccc caggctcccc agcaggcaga agtatgcaaa gcatgcatct caattagtca 4861 gcaaccatag tcccgcccct aactccgccc atcccgcccc taactccgcc cagttccgcc 4921 cattctccgc cccatggctg actaattttt tttatttatg cagaggccga ggccgcctct 4981 gcctctgagc tattccagaa gtagtgagga ggcttttttg gaggcctagg cttttgcaaa 5041 aagctcccgg gagcttgtat atccattttc ggatctgatc aagagacagg atgaggatcg 5101 tttcgcatga ttgaacaaga tggattgcac gcaggttctc cggccgcttg ggtggagagg 5161 ctattcggct atgactgggc acaacagaca atcggctgct ctgatgccgc cgtgttccgg 5221 ctgtcagcgc aggggcgccc ggttcttttt gtcaagaccg acctgtccgg tgccctgaat 5281 gaactgcagg acgaggcagc gcggctatcg tggctggcca cgacgggcgt tccttgcgca 5341 gctgtgctcg acgttgtcac tgaagcggga agggactggc tgctattggg cgaagtgccg 5401 gggcaggatc tcctgtcatc tcaccttgct cctgccgaga aagtatccat catggctgat 5461 gcaatgcggc ggctgcatac gcttgatccg gctacctgcc cattcgacca ccaagcgaaa 5521 catcgcatcg agcgagcacg tactcggatg gaagccggtc ttgtcgatca ggatgatctg 5581 gacgaagagc atcaggggct cgcgccagcc gaactgttcg ccaggctcaa ggcgcgcatg 5641 cccgacggcg aggatctcgt cgtgacccat ggcgatgcct gcttgccgaa tatcatggtg 5701 gaaaatggcc gcttttctgg attcatcgac tgtggccggc tgggtgtggc ggaccgctat 5761 caggacatag cgttggctac ccgtgatatt gctgaagagc ttggcggcga atgggctgac 5821 cgcttcctcg tgctttacgg tatcgccgct cccgattcgc agcgcatcgc cttctatcgc 5881 cttcttgacg agttcttctg agcgggactc tggggttcga aatgaccgac caagcgacgc 5941 ccaacctgcc atcacgagat ttcgattcca ccgccgcctt ctatgaaagg ttgggcttcg 6001 gaatcgtttt ccgggacgcc ggctggatga tcctccagcg cggggatctc atgctggagt 6061 tcttcgccca ccccaacttg tttattgcag cttataatgg ttacaaataa agcaatagca 6121 tcacaaattt cacaaataaa gcattttttt cactgcattc tagttgtggt ttgtccaaac 6181 tcatcaatgt atcttatcat gtctgtatac cgtcgacctc tagctagagc ttggcgtaat 6241 catggtcata gctgtttcct gtgtgaaatt gttatccgct cacaattcca cacaacatac 6301 gagccggaag cataaagtgt aaagcctggg gtgcctaatg agtgagctaa ctcacattaa 6361 ttgcgttgcg ctcactgccc gctttccagt cgggaaacct gtcgtgccag ctgcattaat 6421 gaatcggcca acgcgcgggg agaggcggtt tgcgtattgg gcgctcttcc gcttcctcgc 6481 tcactgactc gctgcgctcg gtcgttcggc tgcggcgagc ggtatcagct cactcaaagg 6541 cggtaatacg gttatccaca gaatcagggg ataacgcagg aaagaacatg tgagcaaaag 6601 gccagcaaaa ggccaggaac cgtaaaaagg ccgcgttgct ggcgtttttc cataggctcc 6661 gcccccctga cgagcatcac aaaaatcgac gctcaagtca gaggtggcga aacccgacag 6721 gactataaag ataccaggcg tttccccctg gaagctccct cgtgcgctct cctgttccga 6781 ccctgccgct taccggatac ctgtccgcct ttctcccttc gggaagcgtg gcgctttctc 6841 atagctcacg ctgtaggtat ctcagttcgg tgtaggtcgt tcgctccaag ctgggctgtg 6901 tgcacgaacc ccccgttcag cccgaccgct gcgccttatc cggtaactat cgtcttgagt 6961 ccaacccggt aagacacgac ttatcgccac tggcagcagc cactggtaac aggattagca 7021 gagcgaggta tgtaggcggt gctacagagt tcttgaagtg gtggcctaac tacggctaca 7081 ctagaagaac agtatttggt atctgcgctc tgctgaagcc agttaccttc ggaaaaagag 7141 ttggtagctc ttgatccggc aaacaaacca ccgctggtag cggtggtttt tttgtttgca 7201 agcagcagat tacgcgcaga aaaaaaggat ctcaagaaga tcctttgatc ttttctacgg 7261 ggtctgacgc tcagtggaac gaaaactcac gttaagggat tttggtcatg agattatcaa 7321 aaaggatctt cacctagatc cttttaaatt aaaaatgaag ttttaaatca atctaaagta 7381 tatatgagta aacttggtct gacagttacc aatgcttaat cagtgaggca cctatctcag 7441 cgatctgtct atttcgttca tccatagttg cctgactccc cgtcgtgtag ataactacga 7501 tacgggaggg cttaccatct ggccccagtg ctgcaatgat accgcgagac ccacgctcac 7561 cggctccaga tttatcagca ataaaccagc cagccggaag ggccgagcgc agaagtggtc 7621 ctgcaacttt atccgcctcc atccagtcta ttaattgttg ccgggaagct agagtaagta 7681 gttcgccagt taatagtttg cgcaacgttg ttgccattgc tacaggcatc gtggtgtcac 7741 gctcgtcgtt tggtatggct tcattcagct ccggttccca acgatcaagg cgagttacat 7801 gatcccccat gttgtgcaaa aaagcggtta gctccttcgg tcctccgatc gttgtcagaa 7861 gtaagttggc cgcagtgtta tcactcatgg ttatggcagc actgcataat tctcttactg 7921 tcatgccatc cgtaagatgc ttttctgtga ctggtgagta ctcaaccaag tcattctgag 7981 aatagtgtat gcggcgaccg agttgctctt gcccggcgtc aatacgggat aataccgcgc 8041 cacatagcag aactttaaaa gtgctcatca ttggaaaacg ttcttcgggg cgaaaactct 8101 caaggatctt accgctgttg agatccagtt cgatgtaacc cactcgtgca cccaactgat 8161 cttcagcatc ttttactttc accagcgttt ctgggtgagc aaaaacagga aggcaaaatg 8221 ccgcaaaaaa gggaataagg gcgacacgga aatgttgaat actcatactc ttcctttttc 8281 aatattattg aagcatttat cagggttatt gtctcatgag cggatacata tttgaatgta 8341 tttagaaaaa taaacaaata ggggttccgc gcacatttcc ccgaaaagtg ccacctgacg 8401 tcgacggatc gggagatctc ccgatcccct atggtgcact ctcagtacaa tctgctctga 8461 tgccgcatag ttaagccagt atctgctccc tgcttgtgtg ttggaggtcg ctgagtagtg 8521 cgcgagcaaa atttaagcta caacaaggca aggcttgacc gacaattgca tgaagaatct 8581 gcttagggtt aggcgttttg cgctgcttcg cgatgtacgg gccagatata cgcgtt //
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